Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs773340 chr13:105325242 T/C PRHOXNB chr13:28552243-28562774:- -0.72 -7.77 2.99E-10 Box Plot
ACC rs773346 chr13:105326675 G/C PRHOXNB chr13:28552243-28562774:- -0.72 -7.77 2.99E-10 Box Plot
ACC rs77355200 chr8:113024955 C/T KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs77427825 chr4:30294136 C/T OR6C3 chr12:55725485-55726420:+ 1.16 10.36 2.99E-14 Box Plot
ACC rs7743694 chr6:119276427 T/C ACTR3C chr7:149941005-150020814:- 1.01 7.8 2.6E-10 Box Plot
ACC rs77538571 chr8:4006968 C/G PRHOXNB chr13:28552243-28562774:- 0.59 7.86 2.11E-10 Box Plot
ACC rs77541036 chr2:25575523 A/G PRHOXNB chr13:28552243-28562774:- 0.7 9.5 5.85E-13 Box Plot
ACC rs77574574 chr1:116270497 T/C GAGE2D chrX:49207160-49214420:+ 0.69 8.13 8.06E-11 Box Plot
ACC rs77574574 chr1:116270497 T/C TFDP3 chrX:132350697-132352376:- 0.97 8.61 1.42E-11 Box Plot
ACC rs77574756 chr1:48867426 C/G AADACL4 chr1:12704566-12727097:+ 0.96 7.76 3.09E-10 Box Plot
ACC rs77619000 chr7:17265501 G/A TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs77625550 chr2:142860393 T/C PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs77714973 chr7:17261375 C/T TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs77718602 chr8:112911256 G/A KRT6C chr12:52862300-52867569:- 0.76 9.02 3.28E-12 Box Plot
ACC rs77730380 chr8:123605810 C/T PRHOXNB chr13:28552243-28562774:- 0.56 7.81 2.59E-10 Box Plot